Questions tagged [mtdna]

Mitochondrial DNA. Questions specific to mitochondrial DNA, such as annotation, inheritance, heteroplasmy.

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How does one distinguish nuclear DNA from mitochondrial DNA when doing WGS?

I'm interested in doing de-novo sequencing but also phylogenetic analysis. In particular, after de-novo sequencing and annotating the genome, I need to align the CO1 gene and the nuclear 28S rRNA gene ...
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