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Tagged with phylogenetics multiple-sequence-alignment
2 questions
2
votes
2
answers
98
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Multiple Alignment cost application
Is there any biological application/case where someone would be interested in the estimated total cost of the alignment between a set of sequences (genes or amino acids) without the aligned sequence ...
2
votes
1
answer
501
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Sequence alignment with MUSCLE
For protein multiple sequence alignment (MSA), I am using MUSCLE (v5.1). The default setting without any specifications gives a 'bad' output even though my proteins are very similar (UniProt sequence ...